Uri Laserson is an algorithm developer based in New York with 14 years of experience and a PhD from MIT. He co-founded and served as CTO of Patch Bio, leading R&D that combined high-throughput sequencing with machine learning to design synthetic regulatory elements, raising $11.5M and engineering a successful acquisition by Ginkgo. His background spans academia and industry—from assistant professor to Senior Director of AI Research—bringing both scientific rigor and product leadership. An active open-source contributor, he has made systems-level contributions to projects like numba, ibis, impyla and ADAM (work on data types, CFFI/LLVM integration, DB clients and genomics formats), reflecting deep backend and low-level engineering skills. At Hudson River Trading he now applies that rare blend of wet‑lab genomics, ML modeling, and low-level systems engineering to build high-performance production algorithms and data pipelines.
Python DB API 2.0 client for Impala and Hive (HiveServer2 protocol)
Role in this project:
Back-end Developer
Contributions:256 commits, 54 PRs, 90 pushes in 2 years 9 months
Contributions summary:Uri's contributions primarily involve implementing features and fixing bugs in the Python client for the Impala distributed query engine. They added support for new features like parameterizable queries and improved the existing API functionality for handling data types such as TIMESTAMP and DECIMAL. The user also refactored the code for modularity and enhanced the internal logging systems for improved debugging and monitoring.
Contributions:23 commits, 9 pushes, 6 comments in 2 years 3 months
Contributions summary:Uri contributed to genomics data analysis and predictive modeling. They implemented code for transcription factor (TF) prediction, including loading and processing genomics data (phylop, gencode, DNase, ChIP-seq). The user designed and utilized a motif scoring function and integrated the results into a model generating features such as phylop scores, and distances to transcription start sites. The changes also include the addition of a 1000 Genome analysis framework.
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